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Anish M.S. Shrestha, Naruki Yoshikawa, and Kiyoshi Asai: Combining probabilistic alignments with read pair information improves accuracy of split-alignments , Bioinformatics 2018 Martin C. Frith and Anish M.S. Shrestha: A Simplified Description of Child Tables for Sequence Similarity Search ,IEEE/ACM Transactions on Computational Biology and Bioinformatics, pp(99):1-1 2018 Anish M.S. Shrestha, Martin C. Frith, Kiyoshi Asai, Hugues Richard: Jointly aligning a group of DNA reads improves accuracy of identifying large deletions , Nucleic Acids Research, 2017 Anish Man Singh Shrestha, Martin C. Frith, and Paul Horton: A Bioinformatician’s Guide to the Forefront of Suffix Array Construction Algorithms, Briefings in Bioinformatics 2014 Mar; 15(2): 138-54 . Anish Man Singh Shrestha and Martin C. Frith: An Approximate Bayesian Approach to Mapping Paired-End DNA Reads to a Reference Genome , Bioinformatics (29) 8, pp 965 – 972, 2013 ; doi: 10.1093/bioinformatics/btt073. Anish Man Singh Shrestha, Satoshi Tayu, Shuichi Ueno: Bandwidth of Convex Bipartite Graphs and Related Graphs , Information Processing Letters, Vol.112, pp. 411 – 417, 2012 . Anish Man Singh Shrestha, Asahi Takaoka, Satoshi Tayu, Shuichi Ueno: On Two Problems of Nano-PLA Design ,IEICE Transaction on Information and Systems, Vol E94-D, No.1, pp 35-41, Jan 2011. Anish Man Singh Shrestha, Satoshi Tayu, Shuichi Ueno: On Orthogonal Ray Graphs , Discrete Applied Mathematics, Vol. 158, pp. 1650-1659, 2010.